4.3. BrainSuite Functional PipelineΒΆ

The BrainSuite Functional Pipeline (BFP) processes resting-state and task-based fMRI data.

  • BFP processes 4D fMRI datasets using a combination of tools from AFNI, FSL, BrainSuite and additional in-house tools developed for BrainSuite

  • Performs motion correction and outlier detection

  • Registers the fMRI data to the corresponding T1w anatomical data

  • Generates a representation of the fMRI data in grayordinate space in preparation for group-level analysis