An S4 class for representing colormaps

Slots

cmap_type

A character string for the type of colormap. Valid values are "corr_values", "corr_values_masked_adjusted", "tvalues", "tvalues_adjusted", "log_pvalues", "log_pvalues_adjusted"

cmap_name

A character string for the title of the colormap. This string will be displayed on the colorbar.

values

A numeric vector containing the values or measures to be mapped.

cex

Maximum absolute value of the measure to be mapped.

rgbcolors

A matrix of RGB colors whose size is same as that of the values.

lut

Color look up table

vmin,vmax

Minimum and maximum values

cnegmin

Minimum negative value

cnegmax

Maximum negative value

cposmin

Minimum positive value

cposmax

Maximum positive value