11. References

References

Joshi2022

Joshi AA, Choi S, Chong M, Sonkar G, Gonzalez-Martinez J, Nair D, Wisnowski JL, Haldar JP, Shattuck DW, Damasio H, Leahy RM (2022) A Hybrid High-Resolution Anatomical MRI Atlas with Sub-parcellation of Cortical Gyri using Resting fMRI Journal of Neuroscience Methods 374:109566.

Shattuck2002

Shattuck DW and Leahy RM (2002) BrainSuite: An Automated Cortical Surface Identification Tool Medical Image Analysis, 8(2):129-142.

Shattuck2001b

Shattuck DW and Leahy RM (2001) Graph Based Analysis and Correction of Cortical Volume Topology, IEEE Transactions on Medical Imaging, 20(11)1167-1177.

Shattuck2001a

Shattuck DW, Sandor-Leahy SR, Schaper KA, Rottenberg DA, and Leahy RM (2001) Magnetic Resonance Image Tissue Classification Using a Partial Volume Model NeuroImage 13(5):856-876.

Kim2023

Kim Y, Joshi AA, Choi S, Joshi SH, Bhushan C, Varadarajan D, Haldar JP, Leahy RM, Shattuck DW (2023) BrainSuite BIDS App: Containerized Workflows for MRI Analysis. bioRxiv 2023.03.14.532686; doi: https://doi.org/10.1101/2023.03.14.532686

Bhushan2015

Bhushan C, Haldar JP, Choi S, Joshi AA, Shattuck DW, and Leahy RM (2015) Co-registration and Distortion Correction of Diffusion and Anatomical Images Based on Inverse Contrast Normalization. NeuroImage 115:269-80

Pantazis2010

Pantazis D, Joshi AA, Jintao J, Shattuck DW, Bernstein LE, Damasio H, and Leahy RM (2010) Comparison of landmark-based and automatic methods for cortical surface registration. NeuroImage 49(3):2479-93.

Joshi2007

Joshi AA, Shattuck DW, Thompson PM, and Richard M. Leahy (2007) Surface-Constrained Volumetric Brain Registration Using Harmonic Mappings IEEE Trans. on Medical Imaging 26(12):1657-1669

Joshi2020bssr

Joshi S, Kim Y, Schroeder K, Joshi A, Leahy R, Shattuck DW (2020) The BrainSuite Statistics Toolbox in R (bssr), 26th Annual Meeting of the Organization for Human Brain Mapping, Montreal, Canada.

Joshi2018bfp

Joshi A, McCoy D, Chong M, Li J, Choi S, Shattuck D, Leahy R (2018) BFP: BrainSuite fMRI Pipeline. 23rd Annual Meeting of the Organization for Human Brain Mapping Singapore, June 2018.

Joshi2018ale

Joshi AA, Bhushan C, Salloum R, Wisnowski JL, Shattuck DW, Leahy RM (2018) Using the Anisotropic Laplace Equation to Compute Cortical Thickness. Medical Image Computing and Computer Assisted Intervention (MICCAI) 2018, Granada, Spain September 2018.